Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGCATCACCCAGCTGTG
..(((((((.((((((.(((.&))).)))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395850
GeneSymbolNPIPB5
Binding site1942,1962
Score0.923
Seed1
Au0.353
Energy-20.4
Binding len20
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure