Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGGGGAGCACCCAGCCTTGGACTTTTAGCATAGTGTGTCAGGTC
(((((((((((.((((......&.)))).))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001395861
GeneSymbolNPIPB13
Binding site1685,1731
Score0.974
Seed1
Au0.485
Energy-20.9
Binding len18
Me-7.284
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
Position5UTR
2D Structure