Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAACTGGGTCAGAATGGCGGCAGCGGA
((((.(((((((((((((((.&))))))))))...........))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395861
GeneSymbolNPIPB13
Binding site3383,3415
Score0.846
Seed0
Au0.471
Energy-20.4
Binding len32
Me-8.057
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings22
Pairings in 3prime end7
PositionCDS
2D Structure