Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTGCAAGCTTGCTGGCAGG
(((((((...(.(((((((((&))))))))).)..)))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395861
GeneSymbolNPIPB13
Binding site1163,1185
Score0.846
Seed1
Au0.618
Energy-19.7
Binding len22
Me-11.897
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings13
Pairings in 3prime end8
Position5UTR
2D Structure