Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTGGATGCAGGA
.(((.(((..(((((((((...&)))))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001395891
GeneSymbolCLASP1
Binding site6640,6658
Score0.923
Seed0
Au0.471
Energy-20.6
Binding len18
Me-10.211
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure