Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCATCTGCAGCCCCTTGCTGTAC
.((((((.(.(((((((.(((&)))...))))))).)..)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395906
GeneSymbolOR8G3P
Binding site642,666
Score0.846
Seed1
Au0.529
Energy-19.5
Binding len24
Me-7.349
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure