Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCGCAGCTGTAAG
(((((((((((((.((.....&)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395918
GeneSymbolICOSLG
Binding site5416,5433
Score1.0
Seed1
Au0.412
Energy-24.9
Binding len17
Me-4.794
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure