Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ATCCAGAAAAAAGAAACAAATTCAAGGAGCAGCAGC
..(((((((((((((((((...&))))))))................))))))..))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_001352984
GeneSymbolHMGB4
Binding site86,122
Score0.846
Seed1
Au0.632
Energy-19.2
Binding len36
Me-4.957
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings28
Pairings in 3prime end5
Position5UTR
2D Structure