Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGGTGCCGCGGAGCCCTGGGTTCCCCCCGCTGCGCAGTTGCTGCGGG
((((((((((((((((.((((&)))))))...)))))).............................))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395959
GeneSymbolLOC122455338
Binding site799,852
Score0.846
Seed1
Au0.279
Energy-19.9
Binding len53
Me-3.938
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings46
Pairings in 3prime end7
Position3UTR
2D Structure