Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGTCTCCCGGGCTGCT
..((((((.(((..(..((((&))))..)..))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395960
GeneSymbolLOC122455339
Binding site4,23
Score0.846
Seed1
Au0.327
Energy-20.6
Binding len19
Me-8.392
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
Position5UTR
2D Structure