Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCTTGACTGTGCCAGGTA
((((((((((......((((..&))))....)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001395961
GeneSymbolLOC344065
Binding site2162,2181
Score0.846
Seed1
Au0.632
Energy-17.7
Binding len19
Me-13.224
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure