Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGAGGCAAAATTACTCTGCAGCTGTGAA
((((((((((((..((((...&.)))).)))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395961
GeneSymbolLOC344065
Binding site3774,3804
Score1.0
Seed1
Au0.588
Energy-21.7
Binding len19
Me-6.084
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure