Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGCAGGACTGCAGGGTGCAC
.((((.((((((((.(..(((&)))..).))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001395966
GeneSymbolIGBP1P2
Binding site1372,1394
Score0.923
Seed0
Au0.412
Energy-21.1
Binding len22
Me-6.43
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end5
Position3UTR
2D Structure