Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGGACAGCCCAGCTACAAT
(((.(((((.((((((.(((.&)))..))))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001353
GeneSymbolAKR1C1
Binding site5629,5650
Score0.923
Seed0
Au0.397
Energy-21.1
Binding len21
Me-8.212
Phylopstem-1.2374736666666666
Phylopflank0.010763412500000048
Longest consecutive pairings11
Position of longest consecutive pairings5
Pairings in 3prime end6
Position3UTR
2D Structure