Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTGCAGCTGTAGGAGCT
..((..(((((((((((((..&)))))))))))))..)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396008
GeneSymbolLOC122526780
Binding site3057,3075
Score0.846
Seed0
Au0.309
Energy-22.9
Binding len18
Me-10.977
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings5
Pairings in 3prime end6
PositionCDS
2D Structure