Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTTTACACAGTTGCAAT
(((((((((....((((((((&))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396059
GeneSymbolOR5D3P
Binding site666,684
Score0.923
Seed1
Au0.5
Energy-18.9
Binding len18
Me-12.641
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure