Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTTGCTGGGTTCCTACAGCTGTAT
.((((((((((((...((((.&))))..))))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396061
GeneSymbolOR5BS1P
Binding site635,662
Score0.846
Seed1
Au0.485
Energy-16.3
Binding len27
Me-5.619
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure