Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCTGCCACCCCAGCTGCT
..(((((((.(((.(((((((&))))..))).))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396067
GeneSymbolKRTAP4-16
Binding site228,250
Score0.923
Seed1
Au0.324
Energy-22.9
Binding len22
Me-7.056
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure