Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCGGCAATTGAAAGCTGCAC
.(((((((.(((((((..(((&))).)))))))..))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396080
GeneSymbolERVK3-1
Binding site519,540
Score1.0
Seed1
Au0.559
Energy-21.3
Binding len21
Me-4.85
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure