Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCGGGTGCCCCCTACCCTGTAGCTGCT
..((((((((((..(((.(((&.)))...))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396080
GeneSymbolERVK3-1
Binding site1729,1759
Score0.923
Seed1
Au0.397
Energy-20.9
Binding len22
Me-7.103
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure