Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGTCAACCGCACCCCCAGA
(((..(.((((((((...(((&)))..)))))))).)..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001396242
GeneSymbolSPDYE2
Binding site545,566
Score0.846
Seed0
Au0.353
Energy-17.2
Binding len21
Me-12.865
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
PositionCDS
2D Structure