Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTATTACTTTTGGTACGCG&CAAAAATTAGCCGGGAGTGGTGGTG
((((((((((((((((.....&.))))))))))))))))
Details
MiRNAhsa-miR-126-5p
RefseqIDNM_001397
GeneSymbolECE1
Binding site3557,3582
Score0.846
Seed1
Au0.544
Energy-18.1
Binding len17
Me-3.938
Phylopstem4.176461874999999
Phylopflank4.162365852500001
Longest consecutive pairings16
Position of longest consecutive pairings0
Pairings in 3prime end3
Position3UTR
2D Structure