Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACAAAGTGACGGCAGCCGAGCTGCAGA
((((((((.(((((((.....&.))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001397
GeneSymbolECE1
Binding site1040,1070
Score0.923
Seed1
Au0.412
Energy-24.6
Binding len17
Me-4.994
Phylopstem-0.955925375
Phylopflank-0.20021438737499997
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure