Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGCCTCCGCAGTGCAGC
(((((.((((((..((((((.&))))).)..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001397
GeneSymbolECE1
Binding site3891,3912
Score0.923
Seed0
Au0.324
Energy-22.2
Binding len21
Me-7.985
Phylopstem2.6239265714285716
Phylopflank3.936805012500001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure