Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTACAGCCAGGC
.((((((......(((((....&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001397426
GeneSymbolBLACAT1
Binding site3738,3750
Score0.923
Seed1
Au0.426
Energy-15.1
Binding len12
Me-15.867
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure