Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GGGATTGCAGCTGCAGG
((((((((((((((.(.....&).)))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001397426
GeneSymbolBLACAT1
Binding site2313,2330
Score1.0
Seed1
Au0.368
Energy-23.0
Binding len17
Me-4.673
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure