Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACCGCAGCCACAGC
(((..(((((((((((.....&)))))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001397485
GeneSymbolDDT
Binding site335,352
Score0.846
Seed0
Au0.382
Energy-21.9
Binding len17
Me-11.089
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure