Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCCAGGCTGCAGTGCAGT
(((((.((((((((....(((&)))..))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001398493
GeneSymbolCHST9
Binding site9426,9445
Score0.846
Seed0
Au0.426
Energy-19.1
Binding len19
Me-6.807
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure