Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTATCTGAAAGGCCAGCAGCTGA
...((((((((((((((((((&)))))))......)))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001399
GeneSymbolEDA
Binding site2584,2610
Score0.846
Seed0
Au0.485
Energy-22.9
Binding len26
Me-6.515
Phylopstem0.4022070455999999
Phylopflank0.17945660475000003
Longest consecutive pairings7
Position of longest consecutive pairings19
Pairings in 3prime end8
Position3UTR
2D Structure