Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTTTTGATGTCAGGG
.((((((((.(((.((((....&))))..))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001399796
GeneSymbolCBWD1
Binding site644,662
Score0.846
Seed1
Au0.662
Energy-16.0
Binding len18
Me-5.893
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure