Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTAGTGCTGCGGAGCTGCAGG
(((((((((((((....((((&))))...)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001399817
GeneSymbolKDM5B
Binding site2752,2775
Score1.0
Seed1
Au0.515
Energy-22.0
Binding len23
Me-5.763
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure