Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TATGGCCCGGCTGCAGG
(((((((((.(((((((....&)))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001399817
GeneSymbolKDM5B
Binding site2971,2988
Score0.923
Seed1
Au0.426
Energy-21.9
Binding len17
Me-5.18
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure