Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAGCCGCGGAGGCGAC
((((..((((((((((.....&))))))))))..)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001399957
GeneSymbolMBD1
Binding site11,28
Score0.846
Seed0
Au0.281
Energy-22.9
Binding len17
Me-9.958
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
Position5UTR
2D Structure