Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCTGCCAGGG
.(((((((......((((....&))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001400
GeneSymbolS1PR1
Binding site1478,1490
Score0.846
Seed1
Au0.441
Energy-15.6
Binding len12
Me-14.41
Phylopstem0.5989824
Phylopflank0.5520588024999998
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure