Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGACGTTCCGCAAGAACATTTCCAAGGCCAGCCGCAGCTC
....(((((((((((......&.))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400
GeneSymbolS1PR1
Binding site944,987
Score1.0
Seed0
Au0.397
Energy-21.0
Binding len13
Me-9.78
Phylopstem3.981682272727272
Phylopflank4.270129350000001
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure