Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CTTTGCAATCGCGATGGCAGC
((((...(((((((((((((.&)))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400136
GeneSymbolKLF12
Binding site2228,2249
Score0.846
Seed0
Au0.485
Energy-20.9
Binding len21
Me-11.501
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure