Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCGGAGCAGCTGCAGCA
.....(((((((((((..((.&))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400179
GeneSymbolMRPL23
Binding site381,398
Score0.923
Seed0
Au0.324
Energy-21.3
Binding len17
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure