Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCCGCCAGCCAGCTGCAT
.(((((((((((((((.....&)))))))).....))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400265
GeneSymbolSOGA3
Binding site1,22
Score0.885
Seed1
Au0.373
Energy-23.9
Binding len21
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings13
Pairings in 3prime end3
Position5UTR
2D Structure