Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGACAGCCCTGGCTGCT
..(((((((.((((((..(((&))).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400324
GeneSymbolVIPAS39
Binding site1340,1359
Score0.923
Seed1
Au0.471
Energy-20.9
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure