Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTTGCACCTTCTCAGTGCTGTATGCGGCTGCAGC
((((((((((((.((((((((&))))).)))))...............)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400328
GeneSymbolSEC61A1
Binding site1980,2017
Score0.846
Seed1
Au0.471
Energy-22.6
Binding len37
Me-5.227
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end8
Position3UTR
2D Structure