Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCCCACAGCCGCGGCCTTTGGTGGGCTGTGCAT
.(((((((((((((((..((.&))..))))))))))).............)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400329
GeneSymbolSEC61A1
Binding site1298,1331
Score0.923
Seed1
Au0.324
Energy-23.5
Binding len33
Me-3.793
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings18
Pairings in 3prime end5
PositionCDS
2D Structure