Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGAAGTAGCTGGAGCTGCT
..((((((.(((((((((((.&)))))....)))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400401
GeneSymbolMACROH2A1
Binding site895,918
Score0.923
Seed1
Au0.382
Energy-22.5
Binding len23
Me-6.013
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure