Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGGGGCGGGGCGCGGCGGTCGGTGACCGCGGCCGGGGCTGCAGG
((((((((.(((((((..(((&.)))))))))).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400484
GeneSymbolPBRM1
Binding site102,150
Score0.846
Seed1
Au0.235
Energy-28.1
Binding len21
Me-4.994
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end6
Position5UTR
2D Structure