Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCACCATGGCCACAGCTGCT
..(((((((.((((((..(((&.))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400605
GeneSymbolNCAM1
Binding site2560,2581
Score0.991
Seed1
Au0.456
Energy-22.1
Binding len19
Me-6.2
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings9
Position of longest consecutive pairings9
Pairings in 3prime end6
Position3UTR
2D Structure