Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACTGTAGCAGCTGCTGCTGTT
..(((((.((((((((..(((&)))...)))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001400693
GeneSymbolSNRPN
Binding site1508,1529
Score0.846
Seed0
Au0.397
Energy-21.1
Binding len21
Me-7.271
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure