Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GTCAGTATGTGGTTGGTTACTGTGTATTCGCCAGGA
.(((((((((((..((((....&.))))..)))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001401
GeneSymbolLPAR1
Binding site3129,3165
Score0.846
Seed1
Au0.5
Energy-18.4
Binding len21
Me-5.939
Phylopstem4.122264384615385
Phylopflank5.2279514
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure