Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGGGCCACTCCCGCAGCTGCT
..((((((((((..((..(((&.)))))..)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001407
GeneSymbolCELSR3
Binding site9899,9923
Score0.846
Seed1
Au0.324
Energy-25.7
Binding len19
Me-7.103
Phylopstem4.317354100000001
Phylopflank4.4282104525
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure