Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACAGCCCCAGCAGCAGC
((((.((((.((((((..(((&))))))))).)))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014247
GeneSymbolRAPGEF2
Binding site3457,3477
Score0.923
Seed0
Au0.441
Energy-20.9
Binding len20
Me-9.299
Phylopstem3.1064714999999996
Phylopflank3.3217279107499995
Longest consecutive pairings9
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure