Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCACGCAGCCGCAGCA
.....(((((((((((..(((&)))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014256
GeneSymbolB3GNT3
Binding site338,355
Score1.0
Seed0
Au0.412
Energy-25.1
Binding len17
Me-13.666
Phylopstem0.9689890363636363
Phylopflank1.13661565625
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure