Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGACCCAGCTTAAAGCTGCAGT
((((((((..(((((..((((&))))....)))))...)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_014257
GeneSymbolCLEC4M
Binding site298,323
Score0.846
Seed1
Au0.471
Energy-20.4
Binding len25
Me-6.47
Phylopstem0.0036339125000000097
Phylopflank-0.20510859375000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure